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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909772.1_cds_XP_016459888.1_53369
CDS Infomation

[gene=LOC107783434] [db_xref=GeneID:107783434] [protein=root phototropism protein 3-like] [protein_id=XP_016459888.1] [location=join(17264..17480,17759..18276,21365..21922)] [gbkey=CDS]
Sequence

ATGAAGAAGCTAACATTGCCGGAATCCATAAATTTTCCGGGCAAATCTACTCATTTCTCG
GCCGAATGTTGGTTCGACGACACATGTATCCTCGACATGGACTACTTTGTCAAAACACTT
TCCGGCATTAAAGCCAAAGGTGTTCGTCCTGAACTTATTGGCTCAATTATTACTCACTAT
GCTTCTAAATGGCTTCCTGACCTTTCTACTGGAGAAGGTTCAGAAGTGTTAAGCCCAAAA
AATTTCGAAGACTCACCGGAAAGTGTCACGGCGTTATGGATGAAAAAAAGGTTCTTTGTG
GAAACTTTGGTAGGAATTCTGCCGCCGGAGAAAGATTCAATCCCTTGCAATTTCCTCTTG
CGGCTGCTGAGGGTTGCCAACATGGTTCAGGTCGAACCCAGTTACAGAGCCGAGCTGGAG
AAAAGGATATCGTGGCAACTTGACCAAGCTACTTTGAAAGAGCTAATGATTCCGTCATTT
AGTCACACGTGTGGGACATTGCTAGATGTTGAGCTTGTTCTTAGGTTGGTTAAGAGGTTT
ATGAATTTGGATGAAGCTGTGAGAAGTGGAACAGCTCAAATTAAGGTAGCAAAACTTGTG
GATAATTACTTAGCTGAAGCTGCTGTTGATGCAAACTTGACATTGTCGGAGTTTGTTGCT
CTTGCTGGTGCATTTCCTGAACATGCTCGGGCTACAGATGATGGCTTGTACAGAGCTATT
GACACATATCTCAAAGCGCATCCCGGGGTGACGAAACAAGAAAGGAAAGGTCTATGTAGA
TTGATTGATAGCAGAAAGCTATCGCCAGAGGCATCTCTACATGCAGCACAAAATGAACGT
TTGCCTGTGCGAGCAGTAATTCAAGTATTGTTATCCGAACAAACCAAGCTCAACAATAAC
AAGCAGCAAATTGATTGGAGTGGTTCCTTTATAAGTGGCACCCGAAGCCCCAACGCGGGG
ATTAATGATCAGCCTCCAGCTCGGTGTATGTCAAAGCGCGAAATGAACGTTCAGCAGATG
GAGATAAAGAGGCTAAAAGAAGATGTTCTTAGGCTACAGAGTCAGTGTATGGCAATGCAA
GCACAGATTGAGAAGTTACAAGAAAAGAAAAGAGGTAGCAGTTTTTTCAGTTGGAAGAAG
ATTATTGTACCTTCGTTAGTGAAGCATGATAAATTTGGAGAGGTTGATAGAGAAACTGAT
GTGGGATTTATTGGAAGACAAACTCCTGTGGATATGAAGACTAGGCTTGTTCGAGGCAGA
GCTCCTAACAAGTGGAGGAAATCTTTGTCCTGA

Peptide Sequence

PEP ID

XP_016459888.1
PEP Infomation

PREDICTED: root phototropism protein 3-like [Nicotiana tabacum]
Sequence

MKKLTLPESINFPGKSTHFSAECWFDDTCILDMDYFVKTLSGIKAKGVRPELIGSIITHY
ASKWLPDLSTGEGSEVLSPKNFEDSPESVTALWMKKRFFVETLVGILPPEKDSIPCNFLL
RLLRVANMVQVEPSYRAELEKRISWQLDQATLKELMIPSFSHTCGTLLDVELVLRLVKRF
MNLDEAVRSGTAQIKVAKLVDNYLAEAAVDANLTLSEFVALAGAFPEHARATDDGLYRAI
DTYLKAHPGVTKQERKGLCRLIDSRKLSPEASLHAAQNERLPVRAVIQVLLSEQTKLNNN
KQQIDWSGSFISGTRSPNAGINDQPPARCMSKREMNVQQMEIKRLKEDVLRLQSQCMAMQ
AQIEKLQEKKRGSSFFSWKKIIVPSLVKHDKFGEVDRETDVGFIGRQTPVDMKTRLVRGR
APNKWRKSLS

Transcript Sequence

Gene sequence data has not been registered.